Structure-Activity Relationship of Highly Potent Galactonoamidine Inhibitors toward beta-Galactosidase (Aspergillus oryzae)

by Fan, Qiu-Hua; Claunch, Kailey A.; Striegler, Susanne

A small library of 22 N-substituted galactonoamidines was synthesized, and their structure-activity relationship for inhibition of the hydrolytic activity of beta-galactosidase (Aspergillus oryzae) was evaluated. A fast screening assay in 96-well plate format was used to follow the enzymatic hydrolysis of 2-chloro-4-nitrophenyl-beta-d-galactopyranoside using UV-vis spectroscopy. The aglycon moiety of all compounds was found to have a profound effect on their inhibitory ability. In general, galactonoamidines derived from cyclic aliphatic and linear amines show higher inhibition activity than those derived from benzylamines. Hydrophobic interactions of the methyl group rather than pi-pi stacking interactions of the aromatic ring in p-methylbenzyl-d-galactonoamidine were identified to cause its transition-state-like character and the remarkably high inhibitory ability (K-i = 8 nM). A flexible 3-carbon methylene spacer between the exo N atom of the sugar moiety and a phenyl group furthermore increased the observed apparent inhibition drastically

Journal
Journal of Medicinal Chemistry
Volume
57
Issue
21
Year
2014
Start Page
8999-9009
URL
https://dx.doi.org/10.1021/jm501111y
ISBN/ISSN
1520-4804; 0022-2623
DOI
10.1021/jm501111y